We used microarrays to study the evolution of gene expression in two bacterial ecotypes that coexisted for more than 35000 generations of experimental evolution in an extremely simple environment We s
Pantagruel (Lassalle et al., 2019) was used to infer a maximum-likelihood (ML) “core genome tree” from the concatenated alignments of 291 core-genome genes extracted from the 889 assembled V. cholerae
Phylogeny reconstruction of the OTUs. Newick format. Constructed with RAxML by the evolutionary placement of short sequences within an initial phylogeny of close full length sequences from SILVA datab