Alignment for single-copy marker gene based phylogenomic reconstruction of Coxiellales, Legionellales and related lineages. Excluding JAJRR01 to test for long branch attraction.
Pantagruel (Lassalle et al., 2019) was used to infer a maximum-likelihood (ML) “core genome tree” from the concatenated alignments of 291 core-genome genes extracted from the 889 assembled V. cholerae
Dataset S3 Similarity between any 16S rRNA gene sequences of Woesearchaeota in SILVA_SSU_128 used for inferring the minimum intra-group similarity and the coverage of sequences within the correspondin
