IDR output table based on MACS2 peak calling, for HOAP protein between the biological replicates. The score column represents the scaled IDR value and is used for IDR cutoff, peaks with IDR<0.05 have
We see the percentage of false positive using various methods. Experiments: unit-mean; quantile; MACS peak finder; ChIPDiff; Rank normalization; two-stage unit-mean; ChIPnorm. The thresholds used are
This is a testing dataset for ChIP-seq (chromatin Immunoprecipitation sequencing) peak callers. It was made from a his-tagged tfbD pulldown in Halobacterium salinarum, sequenced on the Illumina GAII.
