The complete mitochondrial genome of <i>Pseudofabraea citricarpa</i> (Dermateaceae: Helotiales) causing <i>Citrus</i> target spot
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https://tandf.figshare.com/articles/dataset/The_complete_mitochondrial_genome_of_i_Pseudofabraea_citricarpa_i_Dermateaceae_Helotiales_causing_i_Citrus_i_target_spot/24465665/1
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<i>Pseudofabraea citricarpa</i> (Dermateaceae: Helotiales) is known as a significant pathogen causing <i>Citrus</i> target spot disease and results in profound yield loss. In the present study, the complete mitochondrial genome (mitogenome) determined based on next-generation sequencing technology. The circular mitogenome (56,935 bp) comprised 14 conserved protein-coding genes (PCGs), 16 ORFs, two ribosomal RNA genes (rns and rnl), one non-coding RNA gene (rnpB), one ribosomal protein S3 (rps3) and 28 transfer RNA (tRNA) genes. The overall base composition is as follows: 36.08% A, 35.25% T, 13.04% C, and 15.63% G, with a GC content of 28.70%. The phylogenetic analysis shows that <i>P. citricarpa</i>, belonging to Dermateaceae, forms a separate clade and is sister to Sclerotiniaceae. The mitogenome of <i>P. citricarpa</i> reported in this study provides more molecular data for further research on the evolutionary relationships of Helotiales.
柑橘生假棒盘孢(Pseudofabraea citricarpa)隶属于柔膜菌目(Helotiales)盘菌科(Dermateaceae),是引发柑橘靶斑病的重要病原菌,可造成严重的产量损失。本研究基于下一代测序技术解析了该菌的完整线粒体基因组(mitogenome)。其环状线粒体基因组全长56935 bp,包含14个保守蛋白编码基因(PCGs)、16个开放阅读框(ORFs)、2个核糖体RNA基因(rns和rnl)、1个非编码RNA基因(rnpB)、1个核糖体蛋白S3(rps3)以及28个转运RNA(tRNA)基因。该基因组的整体碱基组成为:A占36.08%、T占35.25%、C占13.04%、G占15.63%,GC含量为28.70%。系统发育分析结果显示,隶属于盘菌科的P. citricarpa单独形成一个演化支,且与核盘菌科(Sclerotiniaceae)物种互为姊妹群。本研究报道的柑橘生假棒盘孢线粒体基因组,可为后续开展柔膜菌目物种的进化关系研究提供更多分子数据。
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Taylor & Francis创建时间:
2023-10-31




