Processed nascent RNA from Hetzel et al., 2016
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Raw data from Hetzel et al., 2016 (PMID: 27729530) were downloaded from GEO Expression database (accession: GSE83103).<br>The datasets re-processed here are: * 5'GRO-seq (GSM2193123)* GRO-seq rep1 (GSM2193124)* GRO-seq rep2 (GSM2193125)<br><br>Processing was conducted as detailed in the Methods section of Hetzel et al., 2016. Briefly, trimming of adapters from the 3' end of reads, followed by alignement to the TAIR10 genome using STAR (default parameters). Only single-mapping reads were considered. BAM alignment files were processed into stranded bigWig files. Replicates were averaged and then normalized using the total number of mapped reads per million.
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figshare创建时间：
2019-12-07
