Additional file 2 of Highly sex specific gene expression in Jojoba
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Additional file 2: Table S1. The quality check and trimming details for raw RNA reads from 30 flower samples. Table S2. KEGG pathways of down regulated DEGs male flowers relative to female jojoba plants. Table S3. The top six transcription factors families (MYB, ERF, Bhlh, NAC, WRKY, MADS-box). Table S4. Plant hormone associated with flowering in Jojoba plant. Table S5. Coverage, FPKM and TPM of 12 male-specific genes of Y1 and Y2 regions (chr9) at S2, S3 and S4 stages. Table S6 . Gene ontology details of known genes of 51 male specific recognised by Pannzer2. Table S7. Total of 100 up- regulated GO terms detected by Fold-Change-Specific Enrichment Analysis (FSEA).Table S8.Total of 42 down- regulated GO terms detected by Fold-Change-Specific Enrichment Analysis (FSEA).
附加文件2:表S1。30份花样本原始RNA测序读段的质量检测与截切细节。表S2:雄花相较于雌花花霍巴(Jojoba)植株的下调差异表达基因(DEGs, Differentially Expressed Genes)的KEGG通路注释。表S3:排名前六的转录因子家族(MYB、ERF、Bhlh、NAC、WRKY、MADS-box)。表S4:霍霍巴(Jojoba)植株中与开花相关的植物激素。表S5:S2、S3和S4时期,chr9染色体上Y1与Y2区域的12个雄性特异性基因的覆盖度、每百万映射读段每千碱基转录本片段数(FPKM, Fragment Per Kilobase of transcript per Million mapped reads)与每百万转录本数(TPM, Transcripts Per Million)值。表S6:通过Pannzer2鉴定的51个雄性特异性已知基因的基因本体(Gene Ontology, GO)细节。表S7:通过折叠变化特异性富集分析(Fold-Change-Specific Enrichment Analysis, FSEA)检测到的100个上调GO条目。表S8:通过折叠变化特异性富集分析(FSEA)检测到的42个下调GO条目。



