Additional file 2 of Viral community-wide auxiliary metabolic genes differ by lifestyles, habitats, and hosts
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Additional file 2: Table S1. Physicochemical data of the PRE samples. Table S2. Assembly qualities of the scaffolds/contigs. Table S3. Detailed information of the vOTUs identified in the PRE samples. Table S4. Detailed information of virus-host linkages prediction. Table S5. Annotation and abundance of the lytic viral AMGs. Table S6. Annotation and abundance of the temperate viral AMGs. Table S7. Occurred frequencies of viruses containing specific AMG functions in the lytic and temperate viral communities. Table S8. Normalized expression level of lytic viral AMGs in the free-living (FL) and particle-attached (PA) samples. Table S9. Normalized expression level of temperate viral AMGs in the free-living (FL) and particle-attached (PA) samples. Table S10. Enriched AMGs (KOs) among three habitats in the lytic or temperate viral communities. Table S11. Comparisons of the expression level of functional pathways between free-living (FL) and particle-attached (PA) samples in lytic or temperate viruses. Table S12. Number of viruses encoding AMGs that belonged to specific functional pathway in the lytic viruses that could infect the given host order. Table S13. Number of viruses encoding AMGs that belonged to specific functional pathway in the temperate viruses that could infect the given host order. Table S14. Detailed information about the biogeochemical-cycle related viral AMGs in the PRE samples.
附加文件2: 表S1:PRE样品的理化数据。 表S2:支架序列(scaffolds)/重叠群(contigs)的组装质量。 表S3:PRE样品中鉴定得到的病毒操作分类单元(viral Operational Taxonomic Units,vOTUs)的详细信息。 表S4:病毒-宿主关联预测的详细信息。 表S5:裂解性病毒辅助代谢基因(auxiliary metabolic genes,AMGs)的注释信息与丰度。 表S6:温和性病毒辅助代谢基因(AMGs)的注释信息与丰度。 表S7:裂解性与温和性病毒群落中携带特定AMG功能的病毒出现频率。 表S8:裂解性病毒AMGs在自由生活态(free-living,FL)与颗粒附着态(particle-attached,PA)样品中的归一化表达水平。 表S9:温和性病毒AMGs在自由生活态与颗粒附着态样品中的归一化表达水平。 表S10:裂解性或温和性病毒群落中,三类生境下富集的AMGs(KEGG正交基因,KOs)。 表S11:裂解性与温和性病毒中,自由生活态与颗粒附着态样品间功能通路表达水平的比较分析。 表S12:可感染特定宿主目的裂解性病毒中,携带特定功能通路AMGs的病毒数量。 表S13:可感染特定宿主目的温和性病毒中,携带特定功能通路AMGs的病毒数量。 表S14:PRE样品中与生物地球化学循环相关的病毒AMGs的详细信息。



