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Data from: Variation at phenological candidate genes correlates with timing of dispersal and plumage morph in a sedentary bird of prey

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Mendeley Data2024-06-25 更新2024-06-27 收录
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Common buzzard broods with parental identity and morph and timing dataData on common buzzard (Buteo buteo) breeding collected in the field close to Bielefeld, North Rhine-Westphalia. Brood attempts contain data on fledging date and parental identities and melanin morphs.broods.csvGenotyped nestlings with melanin morph, parental identities and morphs and brood timingGenotyped for NPAS2 poly-Q, ADCYAP1 and CREB1nestlings.csvData on common buzzard resightings after being ringed as nestlingsIncludes distance from natal nest, genotypes for ADCYAP1, CREB1, NPAS2 own and parental melanin morphsresighted.csvDataset of juvenile buzzards with identified dispersal behaviourContaining for each individual: distance from natal nest and days since ringing, ADCYAP1, CREB1 and NPAS2 genotypes, melanin morphs of nestlings and offspring.dispersers.csvR code for analysis of data files as performed by Chakarov et al.R code for analysis of associations between parental identity, parental melanin morph and brood timing, buzzard ADCYAP1, CREB1 and NPAS2 genotype and association with timing (of own hatching) and own dispersal behavior.code_Chakarovetal_phenological candidate genes.RSequences of CLOCK, NPAS2, ADCYAP1 and CREB1 of FalconiformesEdited and aligned sequences of CLOCK, NPAS2, ADCYAP1 and CREB1 repeat alleles and flanking regions of phenological candidate gene from Buteo, Accipiter, Milvus, Pernis and Falco.sequencesChakarovetal_clock_adcyap1_creb1_npas2.gb

具有亲本身份、黑色素色型与繁殖时序数据的普通鵟育雏数据集 本数据集源于德国北莱茵-威斯特伐利亚州比勒费尔德附近野外采集的普通鵟(*Buteo buteo*)繁殖数据,每一次育雏尝试均记录了雏鸟离巢日期、亲本身份及黑色素色型(melanin morph)信息。对应数据文件:broods.csv 已完成基因分型的雏鸟数据集,涵盖黑色素色型、亲本身份与形态、育雏时序信息,已针对NPAS2 poly-Q(多聚谷氨酰胺)、ADCYAP1与CREB1基因完成分型。对应数据文件:nestlings.csv 普通鵟雏鸟环志后的重捕数据,包含出生地巢距离、ADCYAP1、CREB1、NPAS2基因型,以及个体自身与亲本的黑色素色型信息。对应数据文件:resighted.csv 具有明确扩散行为记录的幼年普通鵟数据集,每个个体包含以下信息:出生地巢距离、环志后天数、ADCYAP1、CREB1与NPAS2基因型,以及雏鸟阶段与子代的黑色素色型。对应数据文件:dispersers.csv Chakarov等人用于本数据集分析的R脚本代码,可用于分析亲本身份、亲本黑色素色型与育雏时序的关联,以及普通鵟ADCYAP1、CREB1、NPAS2基因型与个体孵化时序、自身扩散行为的关联。对应脚本文件:code_Chakarovetal_phenological candidate genes.R 隼形目鸟类CLOCK、NPAS2、ADCYAP1与CREB1基因序列数据集:包含已编辑并比对的隼形目类群(鵟属、鹰属、鸢属、蜂鹰属、隼属)的物候候选基因CLOCK、NPAS2、ADCYAP1、CREB1重复等位基因及侧翼区域序列。对应序列文件:sequencesChakarovetal_clock_adcyap1_creb1_npas2.gb

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2023-06-28
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