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Rapid Surge of Reassortant A(H1N1) Influenza Viruses in Danish Swine and their Zoonotic Potential
In 2018, a single detection of a novel reassortant swine influenza A virus (swIAV) was made in Denmark. The hemagglutinin (HA) of the virus was from the H1N1 pandemic 2009 (H1N1pdm09) lineage and the
DataCite Commons2025-04-02 更新130
Limited outbreak of highly pathogenic influenza A(H5N1) virus in a Herring Gull colony, Canada, 2022
In summer 2022, highly pathogenic influenza A(H5N1) virus reached the Herring Gull (Larus argentatus) breeding colony on Kent Island, New Brunswick, Canada. Real-time monitoring revealed a self-limi
DataCite Commons2025-05-01 更新90
This project describes Nanopore metagenomic sequencing directly from clinical respiratory samples at a UK hospital during the 2018/19 influenza season, evaluating the applicability of this approach in a routine laboratory as a test for influenza, and investigating where further optimisation is still required before the assay can be deployed in clinical practice. We assessed the performance of this experimental protocol in comparison with routine clinical laboratory tests, and used the influenza sequence data to investigate drug resistance, genetic diversity, and nosocomial transmission events, demonstrating the diverse benefits that can be gained from a metagenomic approach to diagnostics.. Nanopore metagenomic sequencing of influenza virus directly from respiratory samples: diagnosis, drug resistance and nosocomial transmission, United Kingdom, 2018/19 influenza season
We conducted Oxford Nanopore Technologies (Oxford, United Kingdom (UK)) metagenomic sequencing for 180 respiratory samples from a UK hospital during the 2018/19 influenza season, and compared results
NIAID Data Ecosystem50
A/H3N2 HI data
Tab-delimited text file giving hemagglutination inhibition (HI) titers for seasonal A/H3N2 influenza viruses and ferret antisera isolated between 1968 and 2011. The virus strain used in the HI assay a
DataONE2014-02-05 更新100
