遇见数据集

Motif HOCOMOCO files preprocessed for DAStk

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Pre-scanned motif files HOCOMOCO_v11_p1e-6_grch38.tar.gz, HOCOMOCO_v11_p1e-6_hg19.tar.gz and HOCOMOCO_v11_p1e-6_mm10.tar.gz for the GRCh38/hg38, hg19 and mm10 reference genomes, respectively. These files are input files for DAStk (https://github.com/Dowell-Lab/DAStk) and have been generated from HOCOMOCO's v11 mononucleotide model, background-corrected for each reference genome, as described in the following paper: Kulakovskiy, I.V., Vorontsov, I.E., Yevshin, I.S., Sharipov, R.N., Fedorova, A.D., Rumynskiy, E.I., Medvedeva, Y.A., Magana-Mora, A., Bajic, V.B., Papatsenko, D.A., et al. (2018). HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis. Nucleic Acids Res 46, D252–D259.

创建时间:
2023-10-11
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