piciformes_TEs

Files associated with DOI:10.1093/gbe/evy105MELT vcf files - vcf files in a zip repository, each file is output of a MELT analysis for one of four CR1 elements and a specific sensitivity setting (specifics in manuscript, and in file names) these output have not been filtered (procedure described in manuscript)SNP vcf file - output of GATK genotyping for six individuals (after filtering for use in analyses)custom repeat consensus sequences - used for MELT analyses (dryobates_consensus.fasta)REPdenovo repeat identification - output filtered fasta file of REPdenovo analyses identifying repeat elements from kmer searches