Additional file 3 of Did the early full genome sequencing of yeast boost gene function discovery?
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Additional file 3. File 1. This file lists the association between the gene and the article mentioning the gene (defined by the PUBMED ID). Count defines the number of times a gene is mentioned in the associated article. FPE is the FPE-score of the gene in the associated article. File 2. This file lists the yeast-relevant literature items with their publication year. File 3. This file lists the number of new genes reaching a specific FPE threshold as defined by T-threshold categories throughout the years. File 4. This file provides the information of which year the gene (GeneID) is first mentioned (First Mentioned). Subsequently, we provide the number of articles that have been published for the gene until it reaches a specific FPE threshold (T1, T5, T10, ..., T100, T500). The column with "−" value means the gene has not achieved that FPE threshold in the study till December 2022. File 5. This file provides the list of journals publishing the yeast relevant articles until December 2022. The total number of articles for each journal is listed. The projected principal components for the 15 T-threshold categories are given as PC1, PC2 until PC15. Subsequently, the percentage of the contributed FPE score for each journal is given for T0 through T500.
附加文件3 文件1。本文件列出了基因与提及该基因的文献之间的关联关系,文献以PubMed编号(PUBMED ID)标识。其中,Count字段代表某基因在关联文献中被提及的总次数;FPE为该基因在对应关联文献中的FPE评分(FPE-score)。
文件2。本文件列出了酵母相关文献条目及其出版年份。
文件3。本文件统计了历年中达到特定FPE阈值的新基因数量,该阈值由T阈值类别(T-threshold categories)定义。
文件4。本文件提供了基因(GeneID)的首次提及年份(First Mentioned)相关信息。此外,本文件还给出了该基因在达到特定FPE阈值(T1、T5、T10……T100、T500)前已发表的文献总量。字段值为“−”的列表示截至2022年12月,该基因在本研究中未达成对应FPE阈值。
文件5。本文件提供了截至2022年12月发表酵母相关文献的期刊清单,并列出了每种期刊的总发文量。文件给出了15个T阈值类别的投影主成分(Projected Principal Components),依次为PC1至PC15。随后,文件还给出了在T0至T500范围内,各期刊贡献的FPE评分占比。
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figshare创建时间:
2023-08-14
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