In this study, we constructed a benchmarking framework for comprehensive evaluation and comparison of 16 computation tools for teRNA identification and quantification from short-read RNA-seq data.

NIAID Data Ecosystem60

Rana muscosa and rana sierrae, from submission SRS285024. Transcriptome or Gene expression

比较转录组学

两栖动物转录组

Re-assembly of 454 data from two Rana species from BioProject 162931, for comparison with other anuran transcriptomes.

NIAID Data Ecosystem60

MOESM9 of Exploratory analysis of transposable elements expression in the C. elegans early embryo

转座元件表达

通路富集分析

Additional file 9. Enriched pathways associated to genes positively correlated with TE. 1st column contains significantly enriched Reactome pathways associated to genes positively correlated with TE,

Figshare2020-02-29 更新80

Repeat elements study in pluripotent stem cells [RNA-seq]. Homo sapiens

干细胞转录调控

转座元件表达

We surveyed RNA-Seq data to identify those TEs that are transcriptionally active uniquely in human pluripotent cells. We identified one endogenous retrovirus (HERV-H) family, uniquely found in primate

NIAID Data Ecosystem60

Ichthyophis bannanicus strain:wild Transcriptome or Gene expression. Ichthyophis bannanicus strain:wild

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