Additional file 8: of Genome analysis of E. coli isolated from Crohn’s disease patients

Comparison of the OG content of CD-isolates and commensal strains. Columns: OG – orthologous group number; Function – orthologous group function; gene group / global function – function of the operon or a major pathway in which OG participates; crohnall.yes − number of genomes from CrohnAll group containing the OG; crohnall.no − number of genomes from CrohnAll group not containing the OG; commensal.yes − number of genomes from commensal group containing the OG; commensal.no − number of genomes from commensal group not containing the OG; pvalues – Fisher’s test p-value; pvalues.adj – p-value after Holm’s adjustment; CD% / commensal % = % of CD genomes containing the subject OG divided by % of commensal strains containing the subject OG. (XLS 1813 kb)