Metagenomic data acquired by deep sequencing is immensely complex, lacks apparent structure and is typically dominated by unknown species. Using an abundance co-variance strategy, we group highly co-v
Differential statistics for taxa (e.g., diff_sediment_xx, diff_summer_xx, table_norm_xx)) and KEGG-annotated open reading frames (diff_all and diff_rna) comparing season and sample type separately, us
Additional file 7. Spreadsheet tabs providing output of indicator species analysis for microbial taxa distinguishing each species and hybrids vs. progenitors.
Table of P-values based on distance-based ANOVA with 10,000 label permutations comparing average UniFrac distances within (A) and between vs. within (B) bacterial microbiota from smoking and nonsmokin
