Additional file 3 of Characterization of integrated prophages within diverse species of clinical nontuberculous mycobacteria
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Additional file 3. This file contains 6 data tables used in the study. The Predicted_Prophages tab provides details about the predicted prophages including the genomic coordinates, cluster assignment, and the presence/absence of a bacterial virulence gene. The Predicted_Prophages_Edge_Cases lists the coordinates of prophages near the ends of contigs. The Bacterial_Genes tab represents the annotated output of bacterial genes (excluding bacterial virulence genes). The Virulence_Genes represents the annotated output of bacterial virulence genes. The Cluster_Virulence tab groups the predicted prophages by cluster and virulence status. The Virulence_Gene_Origins tab represents a count of the species origin of a virulence gene in the predicted prophages.



