Additional file 2 of Superiority of targeted RNA sequencing for fusion detection and subtype diagnosis in Chinese sarcoma patients: a multicenter study
Summary of RNA-Seq statistics and fusion predictions across all samples. LGS: Low Grade Serous, HGS: High Grade Serous, CCC: Clear cell carcinoma, EMD: Endometrioid tumor, MUC: Mucinous tumor, YKS: Yo
Total RNA extracted from prostate cancer LNCaP cells transfected with siRNA against CTCF(siCTCF), or negative control siRNA (si-)were processed, and sequenced by two different companies using Illumina
The identification of the genomic sequence of the breakpoint flanking regions of the fusion gene translocation was sequenced by next-generation sequencing (NGS).