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Additional file 3: of RGAugury: a pipeline for genome-wide prediction of resistance gene analogs (RGAs) in plants

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植物抗性基因鉴定

拟南芥基因组

数据链接：

https://figshare.com/articles/dataset/Additional_file_3_of_RGAugury_a_pipeline_for_genome-wide_prediction_of_resistance_gene_analogs_RGAs_in_plants/4329245 数据链接链接失效反馈

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资源简介：

Prediction results for NBS-encoding genes in the Arabidopsis genome. (XLSX 58Â kb)

应用场景：

创建时间：

2016-12-14

植物抗性基因鉴定

抗病基因

Solanum americanum clone 954750186 resistance-gene enrichment sequencing (RenSeq) was performed using Oxford Nanopore MinION R7.3 chemistry. The Nanopore RenSeq data was assembled using Canu and polis

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Cucumis melo PI_161375 . Chovelon, V., Feriche-Linares, R., Barreau, G. et al. Building a cluster of NLR genes conferring resistance to pests and pathogens: the story of the Vat gene cluster in cucurbits. Hortic Res 8, 72 (2021). https://doi.org/10.1038/s41438-021-00507-0

植物抗性基因鉴定

作物抗虫育种

Most molecularly characterized plant resistance genes (R genes) belong to the nucleotide-binding-site-leucine-richrepeat (NLR) receptor family and are prone to duplication and transposition with high

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Additional file 1 of Reference-based QUantification Of gene Dispensability (QUOD)

基因可缺失性评估

拟南芥基因组

Additional file 1. SRA IDs of datasets downloaded to conduct the QUOD analysis of the A. thaliana genomes.

Figshare2021-02-10 更新10

A gene regulatory network involving the class II ERF transcriptional repressors in leaf senescence of Arabidopsis thaliana

衰老转录调控

拟南芥基因组

Leaf senescence is the final developmental process that includes the mobilization of nutrients from old leaves to newly growing tissues. The progression of leaf senescence requires dynamic but coordin

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Additional file 10: Table S8. of Identification, characterization, and gene expression analysis of nucleotide binding site (NB)-type resistance gene homologues in switchgrass

植物抗性基因鉴定

SNP验证

Conserved Primers used to validate SNPs detected between ‘Alamo’ and ‘Dacotah’. Table S8 details 12 conserved primer pairs that were used to validate SNPs detected between ‘Alamo’ and ‘Dacotah’. Also

Figshare2016-12-15 更新30

Additional file 3: of RGAugury: a pipeline for genome-wide prediction of resistance gene analogs (RGAs) in plants

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