Foxd binding regions were examined by chromatin immunoprecipitation followed by deep-sequencing using 32-cell embryos of Ciona intestinalis (type A). In this experiment, a Foxd-Gfp fusion gene was exp
oligo-dT and random primed RNA-seq libraries were used to test an improved annotation of the zebrafish transcriptome Overall design: RNA-seq was performed on transgene-positive cells isolated by FACS