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samseq_differential_abundance_across_groups

Dryad2017-01-01 更新2026-04-13 收录

微生物组差异丰度

动物社会群体微生物生态

数据链接：

http://datadryad.org/resource/doi:10.5061/dryad.qf731/27 数据链接链接失效反馈

官方服务：

资源简介：

R script that tests for differential abundance of bacterial phyla, families, and genera among sifaka social groups.

应用场景：

创建时间：

2017-01-01

微生物组差异丰度

环境压力微生物响应

Output files from the No 4. Differentially Abundant ASVs page of the Bocas Hypoxia study. File names and descriptions: **da_asvs_pipeline.rdata** : contains all variables and objects from th

DataONE2024-08-15 更新50

DESeq2 analysis was performed to identify OTUs at Family level which had higher relative abundance in males compared to females and vice versa.

微生物组差异丰度

性别相关微生物组

DESeq2 analysis was performed to identify OTUs at Family level which had higher relative abundance in males compared to females and vice versa.

NIAID Data Ecosystem20

Differential abundance analysis and Correlation Analysis

微生物组差异丰度

环境微生物群落

Results of microbiome differential abundance analysis and correlation analysisat genus level using EdgeR and Spearman-Rank correlation respectively. *BiT: top of spoil dumpB: forestBi: terraces of spo

NIAID Data Ecosystem10

Differentially represented ASVs identified with DESeq2

微生物组差异丰度

植物根际微生物定植

Sets of differentially abundant ASVs identified using DESeq2 in each experimental variant described in Golebiewski et al. " Colonization of axenic beet by rhizosphere bacteria takes place in discree

Figshare2023-10-02 更新30

Microbial genera list of significantly enriched in a discovery odds ratio test.

微生物组差异丰度

P-values were corrected to false discovery rates using the Benjamini and Hochberg method.

NIAID Data Ecosystem10