Materials for "Expansion of the tmRNA sequence database and new tools for search and visualization"

Database of unique tmRNA sequences. Columns:Unique IDGene formGene segments and their positions on the segmentsEncoded proteolytic tag sequenceGenetic code used for tag translation (https://en.wikipedia.org/wiki/List_of_genetic_codes)Comma-separated scores from Aragorn v1.2.40 and the CMs alpha_tmRNA, beta_tmRNA, cyano_tmRNA, permuted_tmRNA, mt-tmRNA, tmRNA, tmRNA_standard, tmRNA_intronTaxonomy (for prokaryotes, from GTDB release 214)Gene sequence with lower case marking tag CDS, intervening sequence (IVS), and bases corresponding to CCA tailCount of known instances of this sequenceKnown instances ([assembly ID for prokaryotes/]GenBank accession/coordinates)Search phase (see Methods)Notez