This sample is part of the GutCyc Collection (www.gutcyc.org), a compendium of environmental pathway / genome databases. GutCyc was constructed from 418 human microbiome assemblies using the open-sour

NIAID Data Ecosystem20

To investigate the role of gut microbiota in E. coli O157 fecal shedding in cattle, 16S rRNA gene amplicon profiling was performed to characterize the mucosa associated microbiota of recto-anal junction of beef steers. Targeted loci

微生物组

肠道病原体定植

Cattle are the primary carrier of E. coli O157, which is a foodborne human pathogen, and the ones shedding > 4 log CFU/gram of feces of E. coli O157 were defined as super-shedder cattle (SS). The rect

NIAID Data Ecosystem00

Characterization of the tissue-associated microbiome in pelvic pouch inflammation. human metagenome

微生物组

储袋炎病理机制

The aim of this study was to determine whether specific organisms in the tissue-associated microbiota are associated with inflammatory pouch complications following IPAA.

NIAID Data Ecosystem20

File_S3_16S_rRNA_ZOTU_copies_table.zip

微生物组

16SrRNA测序

Supplementary File 3: Compressed, decontaminated table of estimated 16S-V4 ZOTU copies and taxonomic assignments across the samples.

NIAID Data Ecosystem00