遇见数据集

Repetitive DNA annotation of Cladosporium fulvum Race 5

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Zenodo2022-03-23 更新2026-05-25 收录
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This dataset consists of repetitive DNA annotation of the genome of <em>Cladosporium fulvum i</em>solate Race 5 (GenBank GCA_020509005.2). Repeats were identified with two versions of RepeatModeler v1.0.11 and v2.0.2. The repeat libraries obtained by both versions are in distinct files: RM1_lib.fasta and RM2_lib.fasta for versions 1 and 2 of RepeatModeler, respectively. The repeat libraries were used to mask the genome of <em>C. fulvum</em> Race 5 using RepeatMasker v4.1.2-p1. The obtained locations of repeats are shown in the GFF files. This dataset is associated with the following publication: A chromosome-scale genome assembly of the tomato pathogen <em>Cladosporium fulvum</em> reveals a compartmentalized genome architecture and the presence of a dispensable chromosome. <em>Microbial Genomics</em>, 2022.

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Zenodo
创建时间:
2022-03-23
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