Analyzed smFISH Dataset

This datatable contains all excitatory cells (<i>slc17a7+</i>) across anterior, intermediate, and posterior sections of the basolateral amygdala. Metadata includes:<br>- <b>gene</b>: denotes gene expressed within given cell- <b>quant</b>: quantified expression of a given gene, normalized so that quantification of each gene adds to 1 for a given cell- <b>X </b>&amp; <b>Y</b>: cell position in space- <b>position</b>: denotes which section the cells came from (anterior intermediate, or posterior)- <b>tsne1 </b>&amp; <b>tsne2</b>: plot these to get tsne visualization (perplexity = 35, max iteration = 6350)- <b>cluster: </b>cells labelled cluster 1-6 - according to hierarchical clustering (distance = Euclidean, method = Ward D2)