This R script creates a whitelist to input into STACKS v. 1.35, by eliminating SNPs from the last bp positions, as well as loci with exceedingly high genetic diversity based on theta.
Details about samples: Species, sites sampled, corresponding area, number of generations reared in the laboratory and number of individuals used in 454 sequencing.
Observed (Obs) FST with selection significance (highlighted P value<0.01) for the three continents (Africa, Asia and Europe), and for Europe and North Africa. Global cross-continental FST scores and T