Human gastric microbiome metagenome. human gut metagenome

NIAID Data Ecosystem2026-03-09 收录

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https://www.ncbi.nlm.nih.gov/bioproject/PRJNA297869

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Human gastric microbiome

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2015-10-06

Tetranucleotide frequencies and ratios of frequencies

Microbiomes are constrained by physicochemical conditions, nutrient regimes, and community interactions across diverse environments, yet genomic signatures of this adaptation remain unclear. Metagenom

DataONE2025-04-16 更新680

GTDB_r89_54k

A collection of (compressed) index database files suitable for use with Centrifuge, Kraken1 and Kraken2 that can be used to classify metagenomes using the GTDB_r89_54k index. More information and de

bridges.monash.edu2019-07-23 更新320

DESMAN files

Output files from DESMAN analysis of the 10 putative Limnohabitans MAGs according to https://github.com/rprops/MetaG_analysis_workflow/wiki/21.-DESMAN.

DataCite Commons2020-08-26 更新170

CAMI Benchmarking Portal

CAMI Benchmarking Portal is a central repository of CAMI resources and web server for the evaluation and ranking of metagenome assembly, binning, and taxonomic profiling software.

国家生物信息中心2025-10-11 更新560

Inappropriate application of mapping algorithms results in length-dependent gene abundances in metagenomic analysis

Multiple biases still exist in metagenomic analysis workflows compromising a precise quantification of microbial species and function. In this study, we demonstrated that inappropriate reads mapping c

DataCite Commons2025-06-01 更新180