Example dataset of mouse spinal cord sections for processing, reconstruction and atlas registration using SpinalJ (Fiederling et al., 2021; ; https://www.biorxiv.org/content/10.1101/2021.05.06.443008v
Pseudo-MRI was created by manually assigning an intensity value to each label value of the hisotologically-derived atlas based on the intensity of the matching structure in MRI template for which it i
This dataset provides a population average ex vivo mouse brain MRI template that includes the skull, along with a corresponding brain mask for automated skull stripping and atlas registration workflow
