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Additional file 3 of New approach for genomic characterisation of equine sarcoid-derived BPV-1/-2 using nanopore-based sequencing

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Additional file 3. A complete overview of the genome organization, highlighting all BPV-1 mutations compared to the corresponding reference sequence. Overall, more than 120 unique substitutions were observed in the BPV-1 genomes, with some being present in all our sequences. One of these samples (batch 1, sample 3) contained multiple sequence variants: 1R3b with reference and 1R3a with mutant E5. Interestingly, several major deletions in the BPV-1 genomes were only present in part of the sequencing data, and the non-deleted variant could be detected in parallel.

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2022-01-06
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