Locating transgene integration sites by Nanopore sequencing

NIAID Data Ecosystem2026-03-10 收录

转基因整合位点定位

纳米孔长读长测序

数据链接：

https://www.ncbi.nlm.nih.gov/bioproject/PRJNA508423 数据链接链接失效反馈

官方服务：

资源简介：

Ultra-long read nanopore sequencing to locate the integration sites of transgenes in the mouse genome.

创建时间：

2018-12-04

N1 single-cell barcoded RNA-seq ONT long-reads

单细胞RNA测序

纳米孔长读长测序

The dataset is extracted from an RNA human sample. The RNA molecules have 10x Genomics single-cell barcodes + UMI + Illumina read adapters added to them. Then the ONT long-read adatper is added. The l

Figshare2023-06-13 更新110

Nanopore long-read transcriptomics profiling reveals gene expression signatures of mouse tumor endothelial cells 2H-11. Nanopore long-read transcriptomics profiling reveals gene expression signatures of mouse tumor endothelial cells 2H-11

皮肤癌转录组学

纳米孔长读长测序

Purpose: Nanopore sequencing is a new generation of Nanopore-based single-molecule real-time electrical signal sequencing technology for full-length transcriptome sequencing. We use Oxford Nanopore Te

NIAID Data Ecosystem90

Minion 1D² Reads From Mus Musculus Gl261 Cell Lines

癌细胞转录组

纳米孔长读长测序

Called FASTQ and raw FAST5 MinION cDNA reads (1D²) from a murine GL261 neuroblastoma cell line, cultured at the Malaghan Institute of Medical Research, sequenced on a R9.5 flow cell in August 2017 usi

Zenodo2020-09-20 更新60

Nanopore MinION raw long-read data for HC139-1 and its transconjugant THC139-1

纳米孔长读长测序

质粒基因组分析

Other heterogeneous plasmid structures are available as raw read shared in figshare for reference

Figshare2020-09-22 更新100

Robust long-read native DNA sequencing using the ONT CsgG Nanopore system. Homo sapiens isolate:HAP1

纳米孔长读长测序

基因组学

The ability to obtain long read lengths during DNA sequencing has several potentially important practical applications. Especially long read lengths have been reported using the Nanopore sequencing me

NIAID Data Ecosystem90

Locating transgene integration sites by Nanopore sequencing

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