Accompanying .sif files used in BTReport
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This record provides Singularity/Apptainer (.sif) images used in the BTReport framework for reproducibility. These containers are intended to be used on HPC systems supporting Singularity or Apptainer. !! The authors of this record do not claim authorship or intellectual credit for the underlying software contained in these images. These containers are redistributed solely for convenience and reproducibility, with full attribution to the original authors and projects [1-3]. !! Included containers:- ollama.sif [1]: Local LLM inference backend- synthseg.sif [2]: Brain tissue and anatomical segmentation- synthmorph_4.sif [3]: Image registration and morphometry [1] Ollama. https://github.com/ollama/ollama [2] Billot, B. et al. SynthSeg: Segmentation of brain MRI scans of any contrast and resolution without retraining. NeuroImage, 2020. [3] Hoffmann, M. et al. SynthMorph: Learning contrast-invariant registration without acquired images. IEEE Transactions on Medical Imaging, 2022.



