Input data for predicting miRNA target genes
收藏资源简介:
This .zip file contains the input files needed for predicting miRNA target genes, which are:miRNA expression data for all the cancer types in TCGA, and was downloaded from TCGA Genomic Data Commons (https://portal. gdc.cancer.gov/).gene expression data for for all the cancer types in TCGA, downloaded from uscs xena. (https://xenabrowser.net/datapages/?dataset=EB++AdjustPANCAN_IlluminaHiSeq_RNASeqV2.geneExp.xena&host=https://pancanatlas.xenahubs.net&removeHub=https://xena.treehouse.gi.ucsc.edu:443)a TCGA sample sheet provides metadata that includes information about each sample, such as the unique barcode for the sample, its associated cancer type.a preprossed known miRNA-target genes data, which was obtained from 5 miRNA targets databases (mir2Disease, miRecords, TarBase, miRTarBase, and TargetScan)



