Metabolomics Publications in PubMed: Embeddings and Associated Datasets
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下载链接：
https://zenodo.org/record/15020143
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资源简介：
File 1: pubmed_metabolomics_clean_01MAR2024.xml
This is a cleaned-up XML file (entries with errors removed) for PubMed metabolomics-related publications covering the period from 1998 to early 2024.
File 2: metabolomics_embeddings_full_tSNE_uMAP_01MAR2024.h5
This file contains the complete embeddings for metabolomics-related articles from PubMed and associated datasets, spanning from 1998 to early 2024. It includes: 1) PubMed data such as PMID, title, abstract, language, journal title, publication year, and authors. 2) The full 768-dimensional embeddings generated using PubMedBERT. 3) uMAP and t-SNE embeddings.
创建时间：
2025-03-13
