Additional file 7 of The Local Edge Machine: inference of dynamic models of gene regulation

Table: Saccharomyces cerevisiae gene expression dynamics used in this study. The wild-type gene expression data of 28 genes over approximately two cell cycles were obtained from previous work [2]. Expression values from each profile were smoothed from 13 experimental time points to 40 time points by fitting a cubic spline (the function splinefun in R package stats). A Rescon Ltd. tool was used to rank the splined profiles by 50 % of the peak expression value. Genes are ordered from earliest (top) to latest (bottom) half-maximal expression and presented in the heat map in Fig. 1. (XLSX 51 kb)