Additional file 2 of Gene panel selection for targeted spatial transcriptomics

NIAID Data Ecosystem2026-05-01 收录

数据链接：

https://figshare.com/articles/dataset/Additional_file_2_of_Gene_panel_selection_for_targeted_spatial_transcriptomics/25067325 数据链接链接失效反馈

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资源简介：

Additional file 2: Table S1. Information of the Moffit, Codeluppi, and Zhang dataset

创建时间：

2024-01-25

Source Data files to reproduce figures in nnSVG paper

空间转录组学

基因表达空间模式识别

Source Data files to reproduce figures in nnSVG paper (Weber et al. 2023, "nnSVG for the scalable identification of spatially variable genes using nearest-neighbor Gaussian processes", Nature Communic

Figshare2023-06-22 更新30

Spatial Transcriptome Analysis of human cancer xenograft co-injected with cancer associated fibroblasts

肿瘤微环境

空间转录组学

Cancer associated fibroblasts (CAFs) are major components of stromal tissues with functional heterogeneity within different locations within tumor. However, whether and how this spatial heterogeneity

NIAID Data Ecosystem20

Gastric cancer Xenium sample - BS06-9313-8_Tumor

空间转录组学

胃癌组织分析

This data is used as a benchmark dataset in the paper titled "Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms wi

Zenodo2025-04-09 更新10

Fine mapping of cell states across anatomical sites in healthy human skin and basal cell carcinoma - Spatial Transcriptomics - 10X Visium. Fine mapping of cell states across anatomical sites in healthy human skin and basal cell carcinoma - Spatial Transcriptomics - 10X Visium

肿瘤微环境

空间转录组学

Our understanding of how human skin cells differ according to body site and tumour formation is limited. To address this we have created a multi-scale spatial atlas of healthy skin and basal cell carc

NIAID Data Ecosystem20

Spatial component of: CELSR3 deficiency leads to tic-related behaviors and dopaminergic alterations in the striatum

空间转录组学

抽动障碍神经机制

The gene CELSR3 (cadherin EGF LAG sevenpass-Gtype receptor 3) has been recently recognized as a high-confidence risk factor for tic disorders (TD). Celsr3 mutant mice displayed tic-like grooming stere

Alliance of Genome Resources10

Additional file 2 of Gene panel selection for targeted spatial transcriptomics

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