Cucumber transcriptome sequencing

we characterized the root transcriptome of two cucumber cultivars during the response to Fusarium wilt in the monoculture system and intercropping with celery, respectively. A core set of Fusarium-resistant genes and SNP markers were determined, together with physiological changes (disease index) and biochemical functions, to provide a comprehensive analysis the mechanisms of Fusarium wilt resistance induced by cucumber genotype and intercropping with celery.