Statistical code (.rmd files) for "Genetic diversity and population structure of parasite infrapopulations within and across hosts for two trophically transmitted trematode parasites" submitted to PeerJ October 2024

<b>R markdown files:</b><b>Abundance_Diversity_Models_Peer</b><b>J</b><b>.</b><b>rmd</b>. This file contains the statistical code for analysis of the parasite infection abundance data and the genetic diversity data.<b>Haplotypes_ShannonDiversity_PeerJ</b><b>.</b><b>rmd</b>. This file contains the statistical code for calculating and analysis of the parasite haplotype frequency, diversity, and Shannon-Weiner diversity of parasite assemblages. <b>Rarefaction_PeerJ</b><b>.</b><b>rmd</b>. This file contains the statistical code for construction of haplotype rarefaction curves using data obtained from EstimateS rarefaction analysis.