The first, second, and third columns show the size of the database chunk, the computation time, and the acceleration in processing speed relative to GHOSTX with 2 GB database chunks, respectively.

NIAID Data Ecosystem40

Enhancement of the predicted SVs by CNVnator using different bin sizes.

基因组结构变异检测

生物信息学优化

The length of the screening window surrounding predicted breakpoints is 400 bp. “GS-ov” SVs are referred to as gold-standard overlapping SVs. “l/r match” represents SVs with partial-boundary-match (le

Figshare2021-10-11 更新20

Aligner optimization increases accuracy and decreases compute times in multi-species sequence data

序列比对

生物信息学优化

As sequencing technologies have evolved, the tools to analyze these sequences have made similar advances. However, for multi-species samples, we observed important and adverse differences in alignment

DataONE2020-06-24 更新50

Effect of the size of the pre-selection of dataset using Strategy 2.

蛋白质分类

生物信息学优化

Test results using Strategy 2 with different sizes of the pre-selected native proteins, which range from 0% to 60% while the pre-selected decoys are fixed as the top 1 level, and with different pre-se

Figshare2015-12-02 更新40

Possible minimizer sampling versions based on the optimization techniques.

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