hg19KIndel: Ethnicity normalized human reference genome

The above zip files (hg19KIndel_Resource.zip) contains the following folders. Specific Details about how each file within the below mentioned folders were derived are present in individual README files for each folder 1) hg19Kindel -hg19Kindel.fa - fasta file representing the modified assembly 2) Gene Annotations -hg19_refGene.txt - RefSeq gene annotation downloaded from UCSC table browser (for hg19)<br> -hg19Kindel_refGene.txt - RefSeq gene annotation corresponding to hg19Kindel Genome 3) SnpEff_Database -snpEffectPredictor.bin - Binary file used by SnpEff to annotate variants 4) LiftOver_and_Chain_File -hg19Kindeltohg19.over.chain - UCSC chain file for lifting coordinates from hg19Kindel to hg19<br> -convert_cordinates_vcf.py - Python script to liftover variants(vcf) (only point coordinates) called on hg19Kindel to hg19 coordinate frame