Table S5

Table S5. Differentially expressed genes identified by RNAseq in sample comparisons highlighting the effect of SARS-CoV-2. Entrez GeneID NCBI unique gene identifier Gene Symbol Common abbreviated gene symbol Aliases Alternate commonly used abbreviated gene symbols description Gene name/Gene description other_designations Alternate gene name/gene description Base mean Mean of normalized counts log2(FC) Log(base 2) fold change StdErr Standard error Wald-Stats Wald statistic P-value P-value P-adj Adjusted p-value (bonferroni correction) Scaffold Scaffold where gene is located Chromosome Chromosome where gene is located Start Start of gene (bp position) End End of gene (bp position) Strand Strand gene is on DE?(y/n) If gene is significantly differentially expressed (adjusted p-value ≤0.05, |log2(FC)|≥1) or not (y = yes, n=no) Sample Description and codes xx16 Vehicle treated no virus samples at 16 hours xV16 Vehicle treated virus samples at 16 hours xx48 Vehicle treated no virus samples at 48 hours xV48 Vehicle treated virus samples at 48 hours Nx16 Niclosamide treated no virus samples at 16 hours NV16 Niclosamide treated virus samples at 16 hours Nx48 Niclosamide treated no virus samples at 48 hours NV48 Niclosamide treated virus samples at 48 hours