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Extract reads from bam file based on presence of specific allele

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Mendeley Data2024-01-31 更新2024-06-29 收录
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Python script that reads from bam file based on presence of alleles in text file (text file with three columns: 1. Chromsome, 2. Position, 3. alllele [A, T, C, G]). Returns a bam file with extracted reads. See script for more details. example: python get_male_spec_reads.py -b bam.file -s snp.file

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2024-01-31
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