conformational dynamics of the transcription bubble in RNAP-promoter open complex - FPS analysis - output for analysis of RPo state

The fileset include output of FPS analysis applied onto the <i>RPo state</i> conformation. It includes:<br>1. distances.txt - a table of the best fit D-A distances, and their deviations from the experimental mean D-A distances2. RMSD.txt - the RMSD of the fit3. Rtable_RDAMean.txt - a table that includes the calculated mean D-A distances4. .pml scripts that allow presentation of the outcome of FPS analysis in PyMOL5. .pse file that includes combined_file_RPo_dwells6. .xyz files that include the dyes' AVs for the optimized structure