Supplementary data from: Effect of mass azithromycin distribution on antibiotic resistance in the gut and nasopharynx: A cluster-randomized trial

The data contained in this repository was collected as part of a trial that studies the effects of repeated twice-yearly azithromycin mass drug distribution (MDA) in a pediatric population enrolled in a clinical trial in Niger. MDA has been shown to reduce all-cause childhood mortality, but the potential selection of antibiotic resistance (AMR) is a major public health concern. The repository contains supporting material describing the sequencing quality of samples, while the host-cleaned sequencing data itself can be found in the Sequencing Read Archive (SRA) under BioProject ID PRJNA1337442.