MOESM1 of Elucidating the endogenous synovial fluid proteome and peptidome of inflammatory arthritis using label-free mass spectrometry

Additional file 1. Table S1: Complete protein group report for proteomics. Table S2: Complete peptide report for proteomics. Table S3: Complete spectra search output for peptidomics. Table S4: Complete list of significantly dysregulated human proteins identified in inflammatory arthritis synovial fluid relative to control synovial fluid. Table S5: Complete list of significantly dysregulated human proteins identified in rheumatoid synovial fluid relative to psoriatic arthritis synovial fluid. Table S6: Functional pathways and regulatory networks associated with significantly dysregulated proteins in IA SF. Table S7: Complete list of significantly dysregulated human peptides identified in inflammatory arthritis synovial fluid relative to control synovial fluid. Table S8: Complete list of significantly dysregulated human peptides identified in rheumatoid synovial fluid relative to psoriatic arthritis synovial fluid. Table S9: Complete list of all predicted antimicrobial peptides in inflammatory arthritis synovial fluid