Additional file 2 of Empirical versus estimated accuracy of imputation: optimising filtering thresholds for sequence imputation

Additional file 2: Detail statistics of the analysis. Excel file containing three sheets. Sheet 1 - Statistics on Phasing result between Dosage (DS) vs Genotype likelihoods (GT) mode. Sheet 2 – Correlation statistics between different mode of running of Beagle and MINIMAC4. Sheet 3 – Correlation statistics when imputing from LD or HD across 3 programs Beagle 5.2, MINIMAC4 and IMPUTE5.