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Alignment of AcrIF7 homologs used as input for dN/dS analysis in codeml.

NIAID Data Ecosystem2026-05-01 收录

数据链接：

https://figshare.com/articles/dataset/Alignment_of_AcrIF7_homologs_used_as_input_for_dN_dS_analysis_in_codeml_/22676780 数据链接链接失效反馈

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Alignment of AcrIF7 homologs used as input for dN/dS analysis in codeml.

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创建时间：

2023-04-21

CRISPR-Cas结构生物学

抗CRISPR蛋白

Crystal structure of Nme1Cas9-sgRNA-dsDNA dimer mediated by double protein inhibitor AcrIIC3 monomers Descriptor: 1,2-ETHANEDIOL, AcrIIC3, CRISPR-associated endonuclease Cas9, ... Authors: Sun, W, Yan

Protein Data Bank Japan2023-11-22 更新50

Data and scripts for Selection acting on indels and substitutions in protein coding sequences M.Bogusz and S.Whelan

分子进化选择压力

编码变异

Protein coding gene pair data, scripts, alignments, analysis results and simulations

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dN/dS calculation of Thermus virus NrdJm evolution

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病毒基因进化机制

A log ratio test of significant overrepresentation of non-synonymous to silent (dN/dS) was estimated with codonml from PAML (Yang 1997, https://doi.org/10.1093/bioinformatics/13.5.555 ; Yang 2007, htt

Figshare2019-01-29 更新20

Parameter estimates and log-likelihood values under different models of variable ω ratios among sites. Site numbers and amino acids refer to the M. galloprovincialis sequence.

分子进化选择压力

位点模型参数估计

Parameter estimates and log-likelihood values under different models of variable ω ratios among sites. Site numbers and amino acids refer to the M. galloprovincialis sequence.

NIAID Data Ecosystem40

Parameter estimates and Log-likelihood values under models of variable ω ratios among branches and sites.

分子进化选择压力

密码子替换模型

Comparisons across neutral and selective models of codon replacements were done with the set of concatenated genes encoding ribosomal proteins in lophotrochozoans using different foreground internal b

Figshare2015-12-02 更新20

Alignment of AcrIF7 homologs used as input for dN/dS analysis in codeml.

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